debian-12-4.05_opam-2.1

2024-05-10 16:00.05: New job: test patricoferris/ocaml-hwloc https://github.com/patricoferris/ocaml-hwloc.git#refs/heads/main (3447dc5c40f0d868529aafcc84b5d2d971062b30) (linux-x86_64:debian-12-4.05_opam-2.1)
Base: ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef
Opam project build


To reproduce locally:


git clone --recursive "https://github.com/patricoferris/ocaml-hwloc.git" -b "main" && cd "ocaml-hwloc" && git reset --hard 3447dc5c
cat > Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef
# debian-12-4.05_opam-2.1
USER 1000:1000
ENV CLICOLOR_FORCE="1"
ENV OPAMCOLOR="always"
WORKDIR /src
RUN sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam
RUN opam init --reinit -ni
RUN uname -rs && opam exec -- ocaml -version && opam --version
WORKDIR /src
RUN sudo chown opam /src
RUN cd ~/opam-repository && (git cat-file -e 2275b400535e884d216047a092e70705139c9e41 || git fetch origin master) && git reset -q --hard 2275b400535e884d216047a092e70705139c9e41 && git log --no-decorate -n1 --oneline && opam update -u
COPY --chown=1000:1000 hwloc.opam ./
RUN opam pin add -yn hwloc.dev './'
ENV DEPS="alcotest.1.5.0 astring.0.8.5 base-bigarray.base base-threads.base base-unix.base bigarray-compat.1.1.0 cmdliner.1.0.4 conf-autoconf.0.1 conf-automake.1 conf-libtool.1 conf-which.1 csexp.1.5.2 ctypes.0.22.0 dune.3.15.2 dune-configurator.3.15.2 fmt.0.8.9 integers.0.7.0 ocaml.4.05.0 ocaml-base-compiler.4.05.0 ocaml-config.1 ocaml-secondary-compiler.4.08.1-1 ocaml-syntax-shims.1.0.0 ocamlbuild.0.14.3 ocamlfind.1.9.6 ocamlfind-secondary.1.9.6 re.1.11.0 seq.0.3.1 stdlib-shims.0.3.0 topkg.1.0.7 uutf.1.0.3"
ENV CI="true"
ENV OCAMLCI="true"
RUN opam update --depexts && opam install --cli=2.1 --depext-only -y hwloc.dev $DEPS
RUN opam install $DEPS
COPY --chown=1000:1000 . /src
RUN opam exec -- dune build @install @check @runtest && rm -rf _build


END-OF-DOCKERFILE
docker build .
END-REPRO-BLOCK


2024-05-10 16:00.05: Using cache hint "patricoferris/ocaml-hwloc-ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef-debian-12-4.05_opam-2.1-957253c935d60892f369e98a8d5f4c34"
2024-05-10 16:00.05: Using OBuilder spec:
((from ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef)
 (comment debian-12-4.05_opam-2.1)
 (user (uid 1000) (gid 1000))
 (env CLICOLOR_FORCE 1)
 (env OPAMCOLOR always)
 (workdir /src)
 (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
 (run (shell "opam init --reinit -ni"))
 (run (shell "uname -rs && opam exec -- ocaml -version && opam --version"))
 (workdir /src)
 (run (shell "sudo chown opam /src"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "cd ~/opam-repository && (git cat-file -e 2275b400535e884d216047a092e70705139c9e41 || git fetch origin master) && git reset -q --hard 2275b400535e884d216047a092e70705139c9e41 && git log --no-decorate -n1 --oneline && opam update -u"))
 (copy (src hwloc.opam) (dst ./))
 (run (network host)
      (shell "opam pin add -yn hwloc.dev './'"))
 (env DEPS "alcotest.1.5.0 astring.0.8.5 base-bigarray.base base-threads.base base-unix.base bigarray-compat.1.1.0 cmdliner.1.0.4 conf-autoconf.0.1 conf-automake.1 conf-libtool.1 conf-which.1 csexp.1.5.2 ctypes.0.22.0 dune.3.15.2 dune-configurator.3.15.2 fmt.0.8.9 integers.0.7.0 ocaml.4.05.0 ocaml-base-compiler.4.05.0 ocaml-config.1 ocaml-secondary-compiler.4.08.1-1 ocaml-syntax-shims.1.0.0 ocamlbuild.0.14.3 ocamlfind.1.9.6 ocamlfind-secondary.1.9.6 re.1.11.0 seq.0.3.1 stdlib-shims.0.3.0 topkg.1.0.7 uutf.1.0.3")
 (env CI true)
 (env OCAMLCI true)
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "opam update --depexts && opam install --cli=2.1 --depext-only -y hwloc.dev $DEPS"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "opam install $DEPS"))
 (copy (src .) (dst /src))
 (run (shell "opam exec -- dune build @install @check @runtest && rm -rf _build"))
)


2024-05-10 16:00.05: Waiting for resource in pool OCluster
2024-05-11 06:39.05: Waiting for worker…
2024-05-11 06:44.18: Got resource from pool OCluster
Building on doris.caelum.ci.dev
All commits already cached
Submodule path 'vendor/hwloc': checked out '093316a897a2eb4972a7a3a5888f40975d03f6bf'
HEAD is now at 3447dc5 Install shared objects
Synchronizing submodule url for 'vendor/hwloc'
Cleared directory 'vendor/hwloc'
Submodule 'vendor/hwloc' (https://github.com/open-mpi/hwloc) unregistered for path 'vendor/hwloc'
Submodule 'vendor/hwloc' (https://github.com/open-mpi/hwloc) registered for path 'vendor/hwloc'
Submodule path 'vendor/hwloc': checked out '093316a897a2eb4972a7a3a5888f40975d03f6bf'


(from ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef)
Unable to find image 'ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef' locally
docker.io/ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef: Pulling from ocaml/opam
96ed11c9ae7f: Pulling fs layer
96ed11c9ae7f: Verifying Checksum
96ed11c9ae7f: Download complete
96ed11c9ae7f: Pull complete
Digest: sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef
Status: Downloaded newer image for ocaml/opam@sha256:bf10f42002710555bb6907d73bfe6fb566ce17520aa938dd6029d90760f548ef
2024-05-11 06:44.18 ---> using "01b639612fdfdf471a1afc824e62d329bd373c87da23bf0586731ef9e8f57ffa" from cache


/: (comment debian-12-4.05_opam-2.1)


/: (user (uid 1000) (gid 1000))


/: (env CLICOLOR_FORCE 1)


/: (env OPAMCOLOR always)


/: (workdir /src)


/src: (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
2024-05-11 06:44.18 ---> using "aec8c1521892515737edefff6818cf75f97188f9c4a4f6e707c5eae298a72181" from cache


/src: (run (shell "opam init --reinit -ni"))
Configuring from /home/opam/.opamrc and then from built-in defaults.
Checking for available remotes: rsync and local, git.
  - you won't be able to use mercurial repositories unless you install the hg command on your system.
  - you won't be able to use darcs repositories unless you install the darcs command on your system.


This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.1, which can't be reverted.
You may want to back it up before going further.


Continue? [Y/n] y
Format upgrade done.


<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository
2024-05-11 06:44.18 ---> using "c88cfc24abc19aac7dde2cd7b8db4552fb768e244147794b6e9b9ff97720b973" from cache


/src: (run (shell "uname -rs && opam exec -- ocaml -version && opam --version"))
Linux 5.15.0-101-generic
The OCaml toplevel, version 4.05.0
2.1.5
2024-05-11 06:44.18 ---> using "9ada24db053541f220c5ea153c3ad2f35a4671ae89d9054efacd7a529d249807" from cache


/src: (workdir /src)


/src: (run (shell "sudo chown opam /src"))
2024-05-11 06:44.18 ---> using "18f7df056b98dc115cf8f55e33ea18b7d859aeb89294d451ec89095f52c34fea" from cache


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "cd ~/opam-repository && (git cat-file -e 2275b400535e884d216047a092e70705139c9e41 || git fetch origin master) && git reset -q --hard 2275b400535e884d216047a092e70705139c9e41 && git log --no-decorate -n1 --oneline && opam update -u"))
From https://github.com/ocaml/opam-repository
 * branch                  master     -> FETCH_HEAD
   eb2dcab0d8..2ae169d7d0  master     -> origin/master
2275b40053 @dra27 maintains ocaml-secondary-compiler


<><> Updating package repositories ><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository


Everything as up-to-date as possible (run with --verbose to show unavailable upgrades).
However, you may "opam upgrade" these packages explicitly, which will ask permission to downgrade or uninstall the conflicting packages.
Nothing to do.
# Run eval $(opam env) to update the current shell environment
2024-05-11 06:44.18 ---> using "b91b4adc3a4402951312ad38c2f1a27192f62df73fd1075270237e15b8bc1c35" from cache


/src: (copy (src hwloc.opam) (dst ./))
2024-05-11 06:44.19 ---> saved as "54cb6586622a0e37d313e2f568b6b754e7bd317100325a9bc86a74743596014d"


/src: (run (network host)
           (shell "opam pin add -yn hwloc.dev './'"))
Package hwloc does not exist, create as a NEW package? [Y/n] y
[hwloc.dev] synchronised (file:///src)
hwloc is now pinned to file:///src (version dev)
2024-05-11 06:44.21 ---> saved as "d085cd06fa52ded1aeb2a6a5e9cf365d77154117e546499f55c41222d924220f"


/src: (env DEPS "alcotest.1.5.0 astring.0.8.5 base-bigarray.base base-threads.base base-unix.base bigarray-compat.1.1.0 cmdliner.1.0.4 conf-autoconf.0.1 conf-automake.1 conf-libtool.1 conf-which.1 csexp.1.5.2 ctypes.0.22.0 dune.3.15.2 dune-configurator.3.15.2 fmt.0.8.9 integers.0.7.0 ocaml.4.05.0 ocaml-base-compiler.4.05.0 ocaml-config.1 ocaml-secondary-compiler.4.08.1-1 ocaml-syntax-shims.1.0.0 ocamlbuild.0.14.3 ocamlfind.1.9.6 ocamlfind-secondary.1.9.6 re.1.11.0 seq.0.3.1 stdlib-shims.0.3.0 topkg.1.0.7 uutf.1.0.3")


/src: (env CI true)


/src: (env OCAMLCI true)


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "opam update --depexts && opam install --cli=2.1 --depext-only -y hwloc.dev $DEPS"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian bookworm InRelease
- Get:2 http://deb.debian.org/debian bookworm-updates InRelease [55.4 kB]
- Get:3 http://deb.debian.org/debian-security bookworm-security InRelease [48.0 kB]
- Get:4 http://deb.debian.org/debian-security bookworm-security/main amd64 Packages [155 kB]
- Fetched 258 kB in 0s (885 kB/s)
- Reading package lists...
- 


<><> Synchronising pinned packages ><><><><><><><><><><><><><><><><><><><><><><>
[hwloc.dev] synchronised (no changes)


[NOTE] Package ocaml-secondary-compiler is already installed (current version is 4.08.1-1).
[NOTE] Package ocaml-config is already installed (current version is 1).
[NOTE] Package ocaml-base-compiler is already installed (current version is 4.05.0).
[NOTE] Package ocaml is already installed (current version is 4.05.0).
[NOTE] Package base-unix is already installed (current version is base).
[NOTE] Package base-threads is already installed (current version is base).
[NOTE] Package base-bigarray is already installed (current version is base).


The following system packages will first need to be installed:
    autoconf automake libtool


<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "automake" "libtool"
- debconf: delaying package configuration, since apt-utils is not installed


2024-05-11 06:44.37 ---> saved as "809d2354d758712f5ca930fc1ce8d7a1a00dcb73e519a726c4e3909768c5fdb8"


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "opam install $DEPS"))
[NOTE] Package ocaml-secondary-compiler is already installed (current version is 4.08.1-1).
[NOTE] Package ocaml-config is already installed (current version is 1).
[NOTE] Package ocaml-base-compiler is already installed (current version is 4.05.0).
[NOTE] Package ocaml is already installed (current version is 4.05.0).
[NOTE] Package base-unix is already installed (current version is base).
[NOTE] Package base-threads is already installed (current version is base).
[NOTE] Package base-bigarray is already installed (current version is base).
The following actions will be performed:
  - install ocamlbuild          0.14.3
  - install cmdliner            1.0.4
  - install conf-libtool        1
  - install ocamlfind           1.9.6
  - install conf-which          1
  - install topkg               1.0.7
  - install ocamlfind-secondary 1.9.6
  - install conf-autoconf       0.1
  - install uutf                1.0.3
  - install astring             0.8.5
  - install dune                3.15.2
  - install conf-automake       1
  - install stdlib-shims        0.3.0
  - install seq                 0.3.1
  - install ocaml-syntax-shims  1.0.0
  - install csexp               1.5.2
  - install bigarray-compat     1.1.0
  - install integers            0.7.0
  - install re                  1.11.0
  - install fmt                 0.8.9
  - install dune-configurator   3.15.2
  - install alcotest            1.5.0
  - install ctypes              0.22.0
===== 23 to install =====


<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved astring.0.8.5  (cached)
-> retrieved alcotest.1.5.0  (cached)
-> retrieved bigarray-compat.1.1.0  (cached)
-> retrieved cmdliner.1.0.4  (cached)
-> retrieved csexp.1.5.2  (cached)
-> installed conf-libtool.1
-> installed conf-which.1
-> retrieved ctypes.0.22.0  (cached)
-> installed conf-autoconf.0.1
-> retrieved fmt.0.8.9  (cached)
-> retrieved integers.0.7.0  (cached)
-> retrieved ocaml-syntax-shims.1.0.0  (cached)
-> retrieved ocamlbuild.0.14.3  (cached)
-> installed conf-automake.1
-> retrieved ocamlfind.1.9.6  (cached)
-> retrieved ocamlfind-secondary.1.9.6  (cached)
-> retrieved re.1.11.0  (cached)
-> retrieved seq.0.3.1  (cached)
-> retrieved stdlib-shims.0.3.0  (cached)
-> retrieved topkg.1.0.7  (cached)
-> retrieved uutf.1.0.3  (cached)
-> retrieved dune-configurator.3.15.2  (cached)
-> retrieved dune.3.15.2  (cached)
-> installed cmdliner.1.0.4
-> installed ocamlfind.1.9.6
-> installed ocamlfind-secondary.1.9.6
-> installed ocamlbuild.0.14.3
-> installed topkg.1.0.7
-> installed uutf.1.0.3
-> installed astring.0.8.5
-> installed dune.3.15.2
-> installed seq.0.3.1
-> installed csexp.1.5.2
-> installed bigarray-compat.1.1.0
-> installed stdlib-shims.0.3.0
-> installed ocaml-syntax-shims.1.0.0
-> installed re.1.11.0
-> installed integers.0.7.0
-> installed fmt.0.8.9
-> installed dune-configurator.3.15.2
-> installed alcotest.1.5.0
-> installed ctypes.0.22.0
Done.
# Run eval $(opam env) to update the current shell environment
2024-05-11 06:45.32 ---> saved as "7e6d1b553950e198abd331b0bb5ec52e4a16070365f365d4349965339463d563"


/src: (copy (src .) (dst /src))
2024-05-11 06:45.33 ---> saved as "958bddee145a624f742a3f76d32f77d8a74b43942ba5275b2a9e7366b5f8c092"


/src: (run (shell "opam exec -- dune build @install @check @runtest && rm -rf _build"))
File "dune-project", line 2, characters 14-17:
2 | (using ctypes 0.1)
                  ^^^
Error: Version 0.1 of the ctypes extension has been deleted in Dune 3.11.
Please port this project to a newer version of the extension, such as 0.3.
Hint: You will also need to upgrade to (lang dune 3.7).
"/usr/bin/env" "bash" "-c" "opam exec -- dune build @install @check @runtest && rm -rf _build" failed with exit status 1
2024-05-11 06:45.34: Job failed: Failed: Build failed