debian-12-4.02_opam-2.1

2024-05-14 12:40.00: New job: test patricoferris/ocaml-variorum https://github.com/patricoferris/ocaml-variorum.git#refs/heads/main (9128770e9df08ca7a90f317acc08b9cd49da6766) (linux-x86_64:debian-12-4.02_opam-2.1)
Base: ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14
Opam project build


To reproduce locally:


git clone --recursive "https://github.com/patricoferris/ocaml-variorum.git" -b "main" && cd "ocaml-variorum" && git reset --hard 9128770e
cat > Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14
# debian-12-4.02_opam-2.1
USER 1000:1000
ENV CLICOLOR_FORCE="1"
ENV OPAMCOLOR="always"
WORKDIR /src
RUN sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam
RUN opam init --reinit -ni
RUN uname -rs && opam exec -- ocaml -version && opam --version
WORKDIR /src
RUN sudo chown opam /src
RUN cd ~/opam-repository && (git cat-file -e 2275b400535e884d216047a092e70705139c9e41 || git fetch origin master) && git reset -q --hard 2275b400535e884d216047a092e70705139c9e41 && git log --no-decorate -n1 --oneline && opam update -u
COPY --chown=1000:1000 variorum.opam ./
RUN opam pin add -yn variorum.dev './'
ENV DEPS="base-bigarray.base base-bytes.base base-ocamlbuild.base base-threads.base base-unix.base bigarray-compat.1.1.0 conf-autoconf.0.1 conf-automake.1 conf-cmake.1 conf-libtool.1 conf-which.1 cppo.1.6.9 cstruct.3.0.2 ctypes.0.18.0 dune.3.15.2 ezjsonm.1.0.0 hex.1.3.0 hwloc.dev integers.0.4.0 jansson.dev jbuilder.1.0+beta20.2 js-build-tools.113.33.04 jsonm.1.0.1 ocaml.4.02.3 ocaml-base-compiler.4.02.3 ocaml-config.1 ocaml-secondary-compiler.4.08.1-1 ocamlbuild.0 ocamlfind.1.9.6 ocamlfind-secondary.1.9.6 ocplib-endian.1.1 result.1.5 sexplib.113.33.03 topkg.1.0.0 uchar.0.0.2 uutf.1.0.2"
ENV CI="true"
ENV OCAMLCI="true"
RUN opam update --depexts && opam install --cli=2.1 --depext-only -y variorum.dev $DEPS
RUN opam install $DEPS
COPY --chown=1000:1000 . /src
RUN opam exec -- dune build @install @check @runtest && rm -rf _build


END-OF-DOCKERFILE
docker build .
END-REPRO-BLOCK


2024-05-14 12:40.00: Using cache hint "patricoferris/ocaml-variorum-ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14-debian-12-4.02_opam-2.1-90ce63ab98d6b282ba2d149d953c1dcc"
2024-05-14 12:40.00: Using OBuilder spec:
((from ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14)
 (comment debian-12-4.02_opam-2.1)
 (user (uid 1000) (gid 1000))
 (env CLICOLOR_FORCE 1)
 (env OPAMCOLOR always)
 (workdir /src)
 (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
 (run (shell "opam init --reinit -ni"))
 (run (shell "uname -rs && opam exec -- ocaml -version && opam --version"))
 (workdir /src)
 (run (shell "sudo chown opam /src"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "cd ~/opam-repository && (git cat-file -e 2275b400535e884d216047a092e70705139c9e41 || git fetch origin master) && git reset -q --hard 2275b400535e884d216047a092e70705139c9e41 && git log --no-decorate -n1 --oneline && opam update -u"))
 (copy (src variorum.opam) (dst ./))
 (run (network host)
      (shell "opam pin add -yn variorum.dev './'"))
 (env DEPS "base-bigarray.base base-bytes.base base-ocamlbuild.base base-threads.base base-unix.base bigarray-compat.1.1.0 conf-autoconf.0.1 conf-automake.1 conf-cmake.1 conf-libtool.1 conf-which.1 cppo.1.6.9 cstruct.3.0.2 ctypes.0.18.0 dune.3.15.2 ezjsonm.1.0.0 hex.1.3.0 hwloc.dev integers.0.4.0 jansson.dev jbuilder.1.0+beta20.2 js-build-tools.113.33.04 jsonm.1.0.1 ocaml.4.02.3 ocaml-base-compiler.4.02.3 ocaml-config.1 ocaml-secondary-compiler.4.08.1-1 ocamlbuild.0 ocamlfind.1.9.6 ocamlfind-secondary.1.9.6 ocplib-endian.1.1 result.1.5 sexplib.113.33.03 topkg.1.0.0 uchar.0.0.2 uutf.1.0.2")
 (env CI true)
 (env OCAMLCI true)
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "opam update --depexts && opam install --cli=2.1 --depext-only -y variorum.dev $DEPS"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "opam install $DEPS"))
 (copy (src .) (dst /src))
 (run (shell "opam exec -- dune build @install @check @runtest && rm -rf _build"))
)


2024-05-14 12:40.00: Waiting for resource in pool OCluster
2024-05-14 12:40.04: Waiting for worker…
2024-05-14 12:40.04: Got resource from pool OCluster
Building on x86-bm-c5.sw.ocaml.org
All commits already cached
Submodule path 'vendor/variorum': checked out '98f7f3c81ee279c520a59f35a9ece996af7234f0'
HEAD is now at 9128770 Merge pull request #4 from patricoferris/parse-json
Synchronizing submodule url for 'vendor/variorum'
Cleared directory 'vendor/variorum'
Submodule 'vendor/variorum' (https://github.com/llnl/variorum) unregistered for path 'vendor/variorum'
Submodule 'vendor/variorum' (https://github.com/llnl/variorum) registered for path 'vendor/variorum'
Submodule path 'vendor/variorum': checked out '98f7f3c81ee279c520a59f35a9ece996af7234f0'


(from ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14)
Unable to find image 'ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14' locally
docker.io/ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14: Pulling from ocaml/opam
5c0ba4786982: Pulling fs layer
5c0ba4786982: Verifying Checksum
5c0ba4786982: Download complete
5c0ba4786982: Pull complete
Digest: sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14
Status: Downloaded newer image for ocaml/opam@sha256:35b5e3747440ffe0a1073d1f79222ce868497a689785b29ea7725612647c9c14
2024-05-14 12:42.19 ---> saved as "b6dffe1cb2dc211fda01c1cd73a3d5db708702d4c8b2db8c126627d44ab1e60d"


/: (comment debian-12-4.02_opam-2.1)


/: (user (uid 1000) (gid 1000))


/: (env CLICOLOR_FORCE 1)


/: (env OPAMCOLOR always)


/: (workdir /src)


/src: (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
2024-05-14 12:42.20 ---> saved as "9a452941799c622b15528ee7d1d1e16357d59ae5f0b17315ce12b21df449d5d8"


/src: (run (shell "opam init --reinit -ni"))
Configuring from /home/opam/.opamrc and then from built-in defaults.
Checking for available remotes: rsync and local, git.
  - you won't be able to use mercurial repositories unless you install the hg command on your system.
  - you won't be able to use darcs repositories unless you install the darcs command on your system.


Continue? [Y/n] y
This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.1, which can't be reverted.
You may want to back it up before going further.


Format upgrade done.


<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository
2024-05-14 12:43.27 ---> saved as "717cf69f99a63acea8dbfcd7c3d9e8a9118482335247b96af9fab3d00fb86cd4"


/src: (run (shell "uname -rs && opam exec -- ocaml -version && opam --version"))
Linux 5.15.0-106-generic
The OCaml toplevel, version 4.02.3
2.1.5
2024-05-14 12:43.28 ---> saved as "3f061a224fe8929c5ae9851fa3906aa433cef92fbe5109c50f2e63ac47c34a15"


/src: (workdir /src)


/src: (run (shell "sudo chown opam /src"))
2024-05-14 12:43.28 ---> saved as "513f4c319d309af7cd8980cb72d82648d7695750a908b72412f455135790947a"


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "cd ~/opam-repository && (git cat-file -e 2275b400535e884d216047a092e70705139c9e41 || git fetch origin master) && git reset -q --hard 2275b400535e884d216047a092e70705139c9e41 && git log --no-decorate -n1 --oneline && opam update -u"))
2275b40053 @dra27 maintains ocaml-secondary-compiler


<><> Updating package repositories ><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository


Everything as up-to-date as possible (run with --verbose to show unavailable upgrades).
However, you may "opam upgrade" these packages explicitly, which will ask permission to downgrade or uninstall the conflicting packages.
Nothing to do.
# Run eval $(opam env) to update the current shell environment
2024-05-14 12:44.32 ---> saved as "b6425a60ee2ca7985fafb6f13ffb38f718548ab6bec76d6fe8b653f299212de5"


/src: (copy (src variorum.opam) (dst ./))
2024-05-14 12:44.32 ---> saved as "494567527dd92d1920d16226cd8031ea6593c3d69649f127d6489fb39906f173"


/src: (run (network host)
           (shell "opam pin add -yn variorum.dev './'"))
Package variorum does not exist, create as a NEW package? [Y/n] y
[variorum.dev] synchronised (file:///src)
The following additional pinnings are required by variorum.dev:
  - hwloc.dev at git+https://github.com/patricoferris/ocaml-hwloc#3447dc5c40f0d868529aafcc84b5d2d971062b30
  - jansson.dev at git+https://github.com/patricoferris/ocaml-jansson#42cb429e722ec64807d75ae401758eb666c9d189
Pin and install them? [Y/n] y
Package hwloc does not exist, create as a NEW package? [Y/n] y
[hwloc.dev] synchronised (no changes)
hwloc is now pinned to git+https://github.com/patricoferris/ocaml-hwloc#3447dc5c40f0d868529aafcc84b5d2d971062b30 (version dev)
Package jansson does not exist, create as a NEW package? [Y/n] y
[jansson.dev] synchronised (no changes)
jansson is now pinned to git+https://github.com/patricoferris/ocaml-jansson#42cb429e722ec64807d75ae401758eb666c9d189 (version dev)
variorum is now pinned to file:///src (version dev)
2024-05-14 12:44.40 ---> saved as "5783d372a2f36492a0e11603bb199621caf6f9ec9829004940a1389cf1e83361"


/src: (env DEPS "base-bigarray.base base-bytes.base base-ocamlbuild.base base-threads.base base-unix.base bigarray-compat.1.1.0 conf-autoconf.0.1 conf-automake.1 conf-cmake.1 conf-libtool.1 conf-which.1 cppo.1.6.9 cstruct.3.0.2 ctypes.0.18.0 dune.3.15.2 ezjsonm.1.0.0 hex.1.3.0 hwloc.dev integers.0.4.0 jansson.dev jbuilder.1.0+beta20.2 js-build-tools.113.33.04 jsonm.1.0.1 ocaml.4.02.3 ocaml-base-compiler.4.02.3 ocaml-config.1 ocaml-secondary-compiler.4.08.1-1 ocamlbuild.0 ocamlfind.1.9.6 ocamlfind-secondary.1.9.6 ocplib-endian.1.1 result.1.5 sexplib.113.33.03 topkg.1.0.0 uchar.0.0.2 uutf.1.0.2")


/src: (env CI true)


/src: (env OCAMLCI true)


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "opam update --depexts && opam install --cli=2.1 --depext-only -y variorum.dev $DEPS"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian bookworm InRelease
- Get:2 http://deb.debian.org/debian bookworm-updates InRelease [55.4 kB]
- Get:3 http://deb.debian.org/debian-security bookworm-security InRelease [48.0 kB]
- Fetched 103 kB in 0s (499 kB/s)
- Reading package lists...


<><> Synchronising pinned packages ><><><><><><><><><><><><><><><><><><><><><><>
[variorum.dev] synchronised (no changes)
[jansson.dev] synchronised (no changes)
[hwloc.dev] synchronised (no changes)


[NOTE] Package ocaml-secondary-compiler is already installed (current version is 4.08.1-1).
[NOTE] Package ocaml-config is already installed (current version is 1).
[NOTE] Package ocaml-base-compiler is already installed (current version is 4.02.3).
[NOTE] Package ocaml is already installed (current version is 4.02.3).
[NOTE] Package base-unix is already installed (current version is base).
[NOTE] Package base-threads is already installed (current version is base).
[NOTE] Package base-ocamlbuild is already installed (current version is base).
[NOTE] Package base-bigarray is already installed (current version is base).


The following system packages will first need to be installed:
    autoconf automake cmake libtool


<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "automake" "cmake" "libtool"
- debconf: delaying package configuration, since apt-utils is not installed


2024-05-14 12:44.58 ---> saved as "f652a52d3bef761722085d8351578488f176898cbe9191866b7c2deaa24fdff9"


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "opam install $DEPS"))


<><> Synchronising pinned packages ><><><><><><><><><><><><><><><><><><><><><><>
[jansson.dev] synchronised (no changes)
[hwloc.dev] synchronised (no changes)


[NOTE] Package ocaml-secondary-compiler is already installed (current version is 4.08.1-1).
[NOTE] Package ocaml-config is already installed (current version is 1).
[NOTE] Package ocaml-base-compiler is already installed (current version is 4.02.3).
[NOTE] Package ocaml is already installed (current version is 4.02.3).
[NOTE] Package base-unix is already installed (current version is base).
[NOTE] Package base-threads is already installed (current version is base).
[NOTE] Package base-ocamlbuild is already installed (current version is base).
[NOTE] Package base-bigarray is already installed (current version is base).
The following actions will be performed:
  - install ocamlbuild          0
  - install conf-libtool        1
  - install ocamlfind           1.9.6
  - install jbuilder            1.0+beta20.2
  - install conf-which          1
  - install conf-cmake          1
  - install uchar               0.0.2
  - install ocamlfind-secondary 1.9.6
  - install js-build-tools      113.33.04
  - install base-bytes          base
  - install conf-autoconf       0.1
  - install dune                3.15.2
  - install sexplib             113.33.03
  - install conf-automake       1
  - install result              1.5
  - install integers            0.4.0
  - install cppo                1.6.9
  - install bigarray-compat     1.1.0
  - install topkg               1.0.0
  - install ocplib-endian       1.1
  - install ctypes              0.18.0
  - install uutf                1.0.2
  - install cstruct             3.0.2
  - install jansson             dev*
  - install hwloc               dev*
  - install jsonm               1.0.1
  - install hex                 1.3.0
  - install ezjsonm             1.0.0
===== 28 to install =====


<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved bigarray-compat.1.1.0  (cached)
-> retrieved cppo.1.6.9  (cached)
-> retrieved cstruct.3.0.2  (cached)
-> installed conf-cmake.1
-> installed conf-libtool.1
-> installed conf-which.1
-> retrieved ctypes.0.18.0  (cached)
-> retrieved ezjsonm.1.0.0  (cached)
-> installed conf-autoconf.0.1
-> retrieved hex.1.3.0  (cached)
-> retrieved integers.0.4.0  (cached)
-> installed conf-automake.1
-> retrieved hwloc.dev  (no changes)
-> retrieved jansson.dev  (no changes)
-> retrieved dune.3.15.2  (cached)
-> retrieved jbuilder.1.0+beta20.2  (cached)
-> installed ocamlbuild.0
-> retrieved jsonm.1.0.1  (cached)
-> retrieved ocamlfind.1.9.6  (cached)
-> retrieved js-build-tools.113.33.04  (https://ocaml.janestreet.com/ocaml-core/113.33/files/js-build-tools-113.33.04.tar.gz)
-> retrieved ocamlfind-secondary.1.9.6  (cached)
-> retrieved ocplib-endian.1.1  (cached)
-> retrieved result.1.5  (cached)
-> retrieved uchar.0.0.2  (cached)
-> retrieved topkg.1.0.0  (cached)
-> retrieved uutf.1.0.2  (cached)
-> retrieved sexplib.113.33.03  (https://ocaml.janestreet.com/ocaml-core/113.33/files/sexplib-113.33.03.tar.gz)
-> installed uchar.0.0.2
-> installed jbuilder.1.0+beta20.2
-> installed ocamlfind.1.9.6
-> installed base-bytes.base
-> installed ocamlfind-secondary.1.9.6
-> installed js-build-tools.113.33.04
-> installed sexplib.113.33.03
-> installed dune.3.15.2
-> installed result.1.5
-> installed bigarray-compat.1.1.0
-> installed integers.0.4.0
-> installed cppo.1.6.9
-> installed ocplib-endian.1.1
-> installed cstruct.3.0.2
-> installed hex.1.3.0
-> installed topkg.1.0.0
-> installed uutf.1.0.2
-> installed jsonm.1.0.1
-> installed ezjsonm.1.0.0
-> installed ctypes.0.18.0
[ERROR] The compilation of hwloc.dev failed at "dune subst".
[ERROR] The compilation of jansson.dev failed at "dune subst".


#=== ERROR while compiling jansson.dev ========================================#
# context     2.1.5 | linux/x86_64 | ocaml-base-compiler.4.02.3 | pinned(git+https://github.com/patricoferris/ocaml-jansson#42cb429e722ec64807d75ae401758eb666c9d189#42cb429e722ec64807d75ae401758eb666c9d189)
# path        ~/.opam/4.02/.opam-switch/build/jansson.dev
# command     ~/.opam/4.02/bin/dune subst
# exit-code   1
# env-file    ~/.opam/log/jansson-1-537c0a.env
# output-file ~/.opam/log/jansson-1-537c0a.out
### output ###
# File "dune-project", line 2, characters 14-17:
# 2 | (using ctypes 0.1)
#                   ^^^
# Error: Version 0.1 of the ctypes extension has been deleted in Dune 3.11.
# Please port this project to a newer version of the extension, such as 0.3.
# Hint: You will also need to upgrade to (lang dune 3.7).


#=== ERROR while compiling hwloc.dev ==========================================#
# context     2.1.5 | linux/x86_64 | ocaml-base-compiler.4.02.3 | pinned(git+https://github.com/patricoferris/ocaml-hwloc#3447dc5c40f0d868529aafcc84b5d2d971062b30#3447dc5c40f0d868529aafcc84b5d2d971062b30)
# path        ~/.opam/4.02/.opam-switch/build/hwloc.dev
# command     ~/.opam/4.02/bin/dune subst
# exit-code   1
# env-file    ~/.opam/log/hwloc-1-a98192.env
# output-file ~/.opam/log/hwloc-1-a98192.out
### output ###
# File "dune-project", line 2, characters 14-17:
# 2 | (using ctypes 0.1)
#                   ^^^
# Error: Version 0.1 of the ctypes extension has been deleted in Dune 3.11.
# Please port this project to a newer version of the extension, such as 0.3.
# Hint: You will also need to upgrade to (lang dune 3.7).


<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - build hwloc   dev
| - build jansson dev
+- 
+- The following changes have been performed
| - install base-bytes          base
| - install bigarray-compat     1.1.0
| - install conf-autoconf       0.1
| - install conf-automake       1
| - install conf-cmake          1
| - install conf-libtool        1
| - install conf-which          1
| - install cppo                1.6.9
| - install cstruct             3.0.2
| - install ctypes              0.18.0
| - install dune                3.15.2
| - install ezjsonm             1.0.0
| - install hex                 1.3.0
| - install integers            0.4.0
| - install jbuilder            1.0+beta20.2
| - install js-build-tools      113.33.04
| - install jsonm               1.0.1
| - install ocamlbuild          0
| - install ocamlfind           1.9.6
| - install ocamlfind-secondary 1.9.6
| - install ocplib-endian       1.1
| - install result              1.5
| - install sexplib             113.33.03
| - install topkg               1.0.0
| - install uchar               0.0.2
| - install uutf                1.0.2
+- 
# Run eval $(opam env) to update the current shell environment


The former state can be restored with:
    /usr/bin/opam switch import "/home/opam/.opam/4.02/.opam-switch/backup/state-20240514124459.export"
"/usr/bin/env" "bash" "-c" "opam install $DEPS" failed with exit status 31
2024-05-14 12:46.19: Job failed: Failed: Build failed