ubuntu-23.04-4.14_opam-2.1

2024-05-12 09:29.09: New job: test patricoferris/ocaml-variorum https://github.com/patricoferris/ocaml-variorum.git#refs/heads/main (9128770e9df08ca7a90f317acc08b9cd49da6766) (linux-x86_64:ubuntu-23.04-4.14_opam-2.1)
Base: ocaml/opam@sha256:2068bc887c3819eb4e0552a98fa5484d2eab0c83fb733e3641616f1b6c2209a2
Opam project build


To reproduce locally:


git clone --recursive "https://github.com/patricoferris/ocaml-variorum.git" -b "main" && cd "ocaml-variorum" && git reset --hard 9128770e
cat > Dockerfile <<'END-OF-DOCKERFILE'
FROM ocaml/opam@sha256:2068bc887c3819eb4e0552a98fa5484d2eab0c83fb733e3641616f1b6c2209a2
# ubuntu-23.04-4.14_opam-2.1
USER 1000:1000
ENV CLICOLOR_FORCE="1"
ENV OPAMCOLOR="always"
WORKDIR /src
RUN sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam
RUN opam init --reinit -ni
RUN uname -rs && opam exec -- ocaml -version && opam --version
WORKDIR /src
RUN sudo chown opam /src
RUN cd ~/opam-repository && (git cat-file -e 307e33d08fc4ccc1ea453ab45b0ead8ed574b97b || git fetch origin master) && git reset -q --hard 307e33d08fc4ccc1ea453ab45b0ead8ed574b97b && git log --no-decorate -n1 --oneline && opam update -u
COPY --chown=1000:1000 variorum.opam ./
RUN opam pin add -yn variorum.dev './'
ENV DEPS="base-bigarray.base base-threads.base base-unix.base bigarray-compat.1.1.0 conf-autoconf.0.1 conf-automake.1 conf-cmake.1 conf-libtool.1 conf-which.1 csexp.1.5.2 cstruct.6.2.0 ctypes.0.22.0 dune.3.15.2 dune-configurator.3.15.2 ezjsonm.1.3.0 fmt.0.9.0 hex.1.5.0 hwloc.dev integers.0.7.0 jansson.dev jsonm.1.0.2 ocaml.4.14.2 ocaml-base-compiler.4.14.2 ocaml-config.2 ocaml-options-vanilla.1 ocamlbuild.0.14.3 ocamlfind.1.9.6 sexplib0.v0.17.0 stdlib-shims.0.3.0 topkg.1.0.7 uutf.1.0.3"
ENV CI="true"
ENV OCAMLCI="true"
RUN opam update --depexts && opam install --cli=2.1 --depext-only -y variorum.dev $DEPS
RUN opam install $DEPS
COPY --chown=1000:1000 . /src
RUN opam exec -- dune build @install @check @runtest && rm -rf _build


END-OF-DOCKERFILE
docker build .
END-REPRO-BLOCK


2024-05-12 09:29.09: Using cache hint "patricoferris/ocaml-variorum-ocaml/opam@sha256:2068bc887c3819eb4e0552a98fa5484d2eab0c83fb733e3641616f1b6c2209a2-ubuntu-23.04-4.14_opam-2.1-eb4b6181a0a74b8b61566279d8712b25"
2024-05-12 09:29.09: Using OBuilder spec:
((from ocaml/opam@sha256:2068bc887c3819eb4e0552a98fa5484d2eab0c83fb733e3641616f1b6c2209a2)
 (comment ubuntu-23.04-4.14_opam-2.1)
 (user (uid 1000) (gid 1000))
 (env CLICOLOR_FORCE 1)
 (env OPAMCOLOR always)
 (workdir /src)
 (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
 (run (shell "opam init --reinit -ni"))
 (run (shell "uname -rs && opam exec -- ocaml -version && opam --version"))
 (workdir /src)
 (run (shell "sudo chown opam /src"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "cd ~/opam-repository && (git cat-file -e 307e33d08fc4ccc1ea453ab45b0ead8ed574b97b || git fetch origin master) && git reset -q --hard 307e33d08fc4ccc1ea453ab45b0ead8ed574b97b && git log --no-decorate -n1 --oneline && opam update -u"))
 (copy (src variorum.opam) (dst ./))
 (run (network host)
      (shell "opam pin add -yn variorum.dev './'"))
 (env DEPS "base-bigarray.base base-threads.base base-unix.base bigarray-compat.1.1.0 conf-autoconf.0.1 conf-automake.1 conf-cmake.1 conf-libtool.1 conf-which.1 csexp.1.5.2 cstruct.6.2.0 ctypes.0.22.0 dune.3.15.2 dune-configurator.3.15.2 ezjsonm.1.3.0 fmt.0.9.0 hex.1.5.0 hwloc.dev integers.0.7.0 jansson.dev jsonm.1.0.2 ocaml.4.14.2 ocaml-base-compiler.4.14.2 ocaml-config.2 ocaml-options-vanilla.1 ocamlbuild.0.14.3 ocamlfind.1.9.6 sexplib0.v0.17.0 stdlib-shims.0.3.0 topkg.1.0.7 uutf.1.0.3")
 (env CI true)
 (env OCAMLCI true)
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "opam update --depexts && opam install --cli=2.1 --depext-only -y variorum.dev $DEPS"))
 (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
      (network host)
      (shell "opam install $DEPS"))
 (copy (src .) (dst /src))
 (run (shell "opam exec -- dune build @install @check @runtest && rm -rf _build"))
)


2024-05-12 09:29.09: Waiting for resource in pool OCluster
2024-05-12 09:29.10: Waiting for worker…
2024-05-12 09:29.28: Got resource from pool OCluster
Building on x86-bm-c5.sw.ocaml.org
hint: Using 'master' as the name for the initial branch. This default branch name
hint: is subject to change. To configure the initial branch name to use in all
hint: of your new repositories, which will suppress this warning, call:
hint: 
hint: 	git config --global init.defaultBranch <name>
hint: 
hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and
hint: 'development'. The just-created branch can be renamed via this command:
hint: 
hint: 	git branch -m <name>
Initialized empty Git repository in /var/cache/obuilder/ocluster/git/ocaml-variorum.git-6229e343ad664c85ad0651ce202ea8c9eed39bf1/.git/
HEAD is now at 9128770 Merge pull request #4 from patricoferris/parse-json
error: could not lock config file .git/modules/vendor/variorum/config: No such file or directory
warning: Could not unset core.worktree setting in submodule 'vendor/variorum'
Cleared directory 'vendor/variorum'
Submodule 'vendor/variorum' (https://github.com/llnl/variorum) registered for path 'vendor/variorum'
Cloning into '/var/cache/obuilder/ocluster/git/ocaml-variorum.git-6229e343ad664c85ad0651ce202ea8c9eed39bf1/vendor/variorum'...
From https://github.com/llnl/variorum
 * branch            98f7f3c81ee279c520a59f35a9ece996af7234f0 -> FETCH_HEAD
Submodule path 'vendor/variorum': checked out '98f7f3c81ee279c520a59f35a9ece996af7234f0'


(from ocaml/opam@sha256:2068bc887c3819eb4e0552a98fa5484d2eab0c83fb733e3641616f1b6c2209a2)
2024-05-12 09:30.13 ---> saved as "1b7fae9a2863fb1c33494fdbab920a627f9fa212803e8c2d7c0f20b025f79883"


/: (comment ubuntu-23.04-4.14_opam-2.1)


/: (user (uid 1000) (gid 1000))


/: (env CLICOLOR_FORCE 1)


/: (env OPAMCOLOR always)


/: (workdir /src)


/src: (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
2024-05-12 09:30.14 ---> saved as "b8ed0c17ec1a0b2925ded094fe55427703ff278571cfaab6ce54de1193eafbb8"


/src: (run (shell "opam init --reinit -ni"))
Configuring from /home/opam/.opamrc and then from built-in defaults.
Checking for available remotes: rsync and local, git.
  - you won't be able to use mercurial repositories unless you install the hg command on your system.
  - you won't be able to use darcs repositories unless you install the darcs command on your system.


This version of opam requires an update to the layout of /home/opam/.opam from version 2.0 to version 2.1, which can't be reverted.
You may want to back it up before going further.


Continue? [Y/n] y
Format upgrade done.


<><> Updating repositories ><><><><><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository
2024-05-12 09:31.31 ---> saved as "1642121db542823b83357826c04fc049d075d3cbe41d110e1c31f2f215a43474"


/src: (run (shell "uname -rs && opam exec -- ocaml -version && opam --version"))
Linux 5.15.0-106-generic
The OCaml toplevel, version 4.14.2
2.1.5
2024-05-12 09:31.31 ---> saved as "4ed9b012611145eecd6b91fed9bf6e896b90b17f7c7c31d0c1163fbf0487a251"


/src: (workdir /src)


/src: (run (shell "sudo chown opam /src"))
2024-05-12 09:31.31 ---> saved as "528878f1a5cf6fdcc05ba22c2e3cbafdfd63661c0e668aa19e99d227a395e809"


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "cd ~/opam-repository && (git cat-file -e 307e33d08fc4ccc1ea453ab45b0ead8ed574b97b || git fetch origin master) && git reset -q --hard 307e33d08fc4ccc1ea453ab45b0ead8ed574b97b && git log --no-decorate -n1 --oneline && opam update -u"))
From https://github.com/ocaml/opam-repository
 * branch                  master     -> FETCH_HEAD
   eb2dcab0d8..fec8ff50cd  master     -> origin/master
307e33d08f @dra27 and @Octachron maintain the 4.08+ packages


<><> Updating package repositories ><><><><><><><><><><><><><><><><><><><><><><>
[default] synchronised from file:///home/opam/opam-repository


Everything as up-to-date as possible (run with --verbose to show unavailable upgrades).
However, you may "opam upgrade" these packages explicitly, which will ask permission to downgrade or uninstall the conflicting packages.
Nothing to do.
# Run eval $(opam env) to update the current shell environment
2024-05-12 09:33.05 ---> saved as "3adb359bd54b27293f7ff3845fb41793424640d033bfb5c89491f9562c3fdee0"


/src: (copy (src variorum.opam) (dst ./))
2024-05-12 09:33.05 ---> saved as "4febddad041e78d830a76401e0c6eac03707f7cb3e423041dadc3cd1e2f46767"


/src: (run (network host)
           (shell "opam pin add -yn variorum.dev './'"))
Package variorum does not exist, create as a NEW package? [Y/n] y
[variorum.dev] synchronised (file:///src)
The following additional pinnings are required by variorum.dev:
  - hwloc.dev at git+https://github.com/patricoferris/ocaml-hwloc#3447dc5c40f0d868529aafcc84b5d2d971062b30
  - jansson.dev at git+https://github.com/patricoferris/ocaml-jansson#42cb429e722ec64807d75ae401758eb666c9d189
Pin and install them? [Y/n] y
Package hwloc does not exist, create as a NEW package? [Y/n] y
[hwloc.dev] synchronised (no changes)
hwloc is now pinned to git+https://github.com/patricoferris/ocaml-hwloc#3447dc5c40f0d868529aafcc84b5d2d971062b30 (version dev)
Package jansson does not exist, create as a NEW package? [Y/n] y
[jansson.dev] synchronised (no changes)
jansson is now pinned to git+https://github.com/patricoferris/ocaml-jansson#42cb429e722ec64807d75ae401758eb666c9d189 (version dev)
variorum is now pinned to file:///src (version dev)
2024-05-12 09:33.14 ---> saved as "a852480e6b39748a27f8c8fd45fb10983a18ccd8c6f208ac0ea2468dd5227fe6"


/src: (env DEPS "base-bigarray.base base-threads.base base-unix.base bigarray-compat.1.1.0 conf-autoconf.0.1 conf-automake.1 conf-cmake.1 conf-libtool.1 conf-which.1 csexp.1.5.2 cstruct.6.2.0 ctypes.0.22.0 dune.3.15.2 dune-configurator.3.15.2 ezjsonm.1.3.0 fmt.0.9.0 hex.1.5.0 hwloc.dev integers.0.7.0 jansson.dev jsonm.1.0.2 ocaml.4.14.2 ocaml-base-compiler.4.14.2 ocaml-config.2 ocaml-options-vanilla.1 ocamlbuild.0.14.3 ocamlfind.1.9.6 sexplib0.v0.17.0 stdlib-shims.0.3.0 topkg.1.0.7 uutf.1.0.3")


/src: (env CI true)


/src: (env OCAMLCI true)


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "opam update --depexts && opam install --cli=2.1 --depext-only -y variorum.dev $DEPS"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://security.ubuntu.com/ubuntu lunar-security InRelease
- Hit:2 http://archive.ubuntu.com/ubuntu lunar InRelease
- Hit:3 http://archive.ubuntu.com/ubuntu lunar-updates InRelease
- Hit:4 http://archive.ubuntu.com/ubuntu lunar-backports InRelease
- Reading package lists...
- 


<><> Synchronising pinned packages ><><><><><><><><><><><><><><><><><><><><><><>
[variorum.dev] synchronised (no changes)
[jansson.dev] synchronised (no changes)
[hwloc.dev] synchronised (no changes)


[NOTE] Package ocaml-options-vanilla is already installed (current version is 1).
[NOTE] Package ocaml-config is already installed (current version is 2).
[NOTE] Package ocaml-base-compiler is already installed (current version is 4.14.2).
[NOTE] Package ocaml is already installed (current version is 4.14.2).
[NOTE] Package base-unix is already installed (current version is base).
[NOTE] Package base-threads is already installed (current version is base).
[NOTE] Package base-bigarray is already installed (current version is base).


The following system packages will first need to be installed:
    autoconf automake cmake libtool


<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "automake" "cmake" "libtool"
- debconf: delaying package configuration, since apt-utils is not installed


2024-05-12 09:33.45 ---> saved as "5c36e809a73538af00fd9bfa5a5bf0b5a92a6ce79714cfc44869e37574ced355"


/src: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
           (network host)
           (shell "opam install $DEPS"))


<><> Synchronising pinned packages ><><><><><><><><><><><><><><><><><><><><><><>
[jansson.dev] synchronised (no changes)
[hwloc.dev] synchronised (no changes)


[NOTE] Package ocaml-options-vanilla is already installed (current version is 1).
[NOTE] Package ocaml-config is already installed (current version is 2).
[NOTE] Package ocaml-base-compiler is already installed (current version is 4.14.2).
[NOTE] Package ocaml is already installed (current version is 4.14.2).
[NOTE] Package base-unix is already installed (current version is base).
[NOTE] Package base-threads is already installed (current version is base).
[NOTE] Package base-bigarray is already installed (current version is base).
The following actions will be performed:
  - install ocamlbuild        0.14.3
  - install conf-libtool      1
  - install ocamlfind         1.9.6
  - install dune              3.15.2
  - install conf-which        1
  - install conf-cmake        1
  - install topkg             1.0.7
  - install stdlib-shims      0.3.0
  - install sexplib0          v0.17.0
  - install csexp             1.5.2
  - install bigarray-compat   1.1.0
  - install conf-autoconf     0.1
  - install uutf              1.0.3
  - install fmt               0.9.0
  - install integers          0.7.0
  - install dune-configurator 3.15.2
  - install conf-automake     1
  - install jsonm             1.0.2
  - install cstruct           6.2.0
  - install ctypes            0.22.0
  - install hex               1.5.0
  - install jansson           dev*
  - install hwloc             dev*
  - install ezjsonm           1.3.0
===== 24 to install =====


<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved bigarray-compat.1.1.0  (cached)
-> retrieved csexp.1.5.2  (cached)
-> retrieved cstruct.6.2.0  (cached)
-> installed conf-cmake.1
-> installed conf-libtool.1
-> installed conf-which.1
-> retrieved ctypes.0.22.0  (cached)
-> installed conf-autoconf.0.1
-> retrieved ezjsonm.1.3.0  (cached)
-> retrieved fmt.0.9.0  (cached)
-> retrieved hex.1.5.0  (cached)
-> installed conf-automake.1
-> retrieved hwloc.dev  (no changes)
-> retrieved integers.0.7.0  (cached)
-> retrieved dune.3.15.2  (cached)
-> retrieved dune-configurator.3.15.2  (cached)
-> retrieved jsonm.1.0.2  (cached)
-> retrieved ocamlbuild.0.14.3  (cached)
-> retrieved ocamlfind.1.9.6  (cached)
-> retrieved sexplib0.v0.17.0  (cached)
-> retrieved jansson.dev  (no changes)
-> retrieved stdlib-shims.0.3.0  (cached)
-> retrieved uutf.1.0.3  (cached)
-> retrieved topkg.1.0.7  (cached)
-> installed ocamlfind.1.9.6
-> installed ocamlbuild.0.14.3
-> installed topkg.1.0.7
-> installed uutf.1.0.3
-> installed fmt.0.9.0
-> installed jsonm.1.0.2
-> installed dune.3.15.2
-> installed csexp.1.5.2
-> installed bigarray-compat.1.1.0
-> installed cstruct.6.2.0
-> installed sexplib0.v0.17.0
-> installed stdlib-shims.0.3.0
-> installed hex.1.5.0
-> installed ezjsonm.1.3.0
-> installed integers.0.7.0
-> installed dune-configurator.3.15.2
-> installed ctypes.0.22.0
[ERROR] The compilation of hwloc.dev failed at "dune subst".
[ERROR] The compilation of jansson.dev failed at "dune subst".


#=== ERROR while compiling jansson.dev ========================================#
# context     2.1.5 | linux/x86_64 | ocaml-base-compiler.4.14.2 | pinned(git+https://github.com/patricoferris/ocaml-jansson#42cb429e722ec64807d75ae401758eb666c9d189#42cb429e722ec64807d75ae401758eb666c9d189)
# path        ~/.opam/4.14/.opam-switch/build/jansson.dev
# command     ~/.opam/4.14/bin/dune subst
# exit-code   1
# env-file    ~/.opam/log/jansson-1-e540f3.env
# output-file ~/.opam/log/jansson-1-e540f3.out
### output ###
# File "dune-project", line 2, characters 14-17:
# 2 | (using ctypes 0.1)
#                   ^^^
# Error: Version 0.1 of the ctypes extension has been deleted in Dune 3.11.
# Please port this project to a newer version of the extension, such as 0.3.
# Hint: You will also need to upgrade to (lang dune 3.7).


#=== ERROR while compiling hwloc.dev ==========================================#
# context     2.1.5 | linux/x86_64 | ocaml-base-compiler.4.14.2 | pinned(git+https://github.com/patricoferris/ocaml-hwloc#3447dc5c40f0d868529aafcc84b5d2d971062b30#3447dc5c40f0d868529aafcc84b5d2d971062b30)
# path        ~/.opam/4.14/.opam-switch/build/hwloc.dev
# command     ~/.opam/4.14/bin/dune subst
# exit-code   1
# env-file    ~/.opam/log/hwloc-1-62253c.env
# output-file ~/.opam/log/hwloc-1-62253c.out
### output ###
# File "dune-project", line 2, characters 14-17:
# 2 | (using ctypes 0.1)
#                   ^^^
# Error: Version 0.1 of the ctypes extension has been deleted in Dune 3.11.
# Please port this project to a newer version of the extension, such as 0.3.
# Hint: You will also need to upgrade to (lang dune 3.7).


<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - build hwloc   dev
| - build jansson dev
+- 
+- The following changes have been performed
| - install bigarray-compat   1.1.0
| - install conf-autoconf     0.1
| - install conf-automake     1
| - install conf-cmake        1
| - install conf-libtool      1
| - install conf-which        1
| - install csexp             1.5.2
| - install cstruct           6.2.0
| - install ctypes            0.22.0
| - install dune              3.15.2
| - install dune-configurator 3.15.2
| - install ezjsonm           1.3.0
| - install fmt               0.9.0
| - install hex               1.5.0
| - install integers          0.7.0
| - install jsonm             1.0.2
| - install ocamlbuild        0.14.3
| - install ocamlfind         1.9.6
| - install sexplib0          v0.17.0
| - install stdlib-shims      0.3.0
| - install topkg             1.0.7
| - install uutf              1.0.3
+- 


The former state can be restored with:
    /usr/bin/opam switch import "/home/opam/.opam/4.14/.opam-switch/backup/state-20240512093346.export"
# Run eval $(opam env) to update the current shell environment
"/usr/bin/env" "bash" "-c" "opam install $DEPS" failed with exit status 31
2024-05-12 09:35.08: Job failed: Failed: Build failed